CancerTracer: a curated database for Intrapatient Tumor Heterogeneity
●Results:
| Cancer Type | Patient Details | Trunk Mutation | Branch Mutation | Private Mutation |
|---|
| Rectal Cancer | p082_p1 | ABCG2(Chr4:89052266:G>A),ACSBG2(Chr19:6177252:G>A),ACSL3(Chr2:223786061:C>A),ACSS3(Chr12:81471925:G>A),ACTC1(Chr15:35086973:C>T),ADAMTS16(Chr5:5242231:G>T),ADGB(Chr6:147103265:A>T),AHNAK(Chr11:62284355:G>A),ALS2(Chr2:202574667:C>A),ARSG(Chr17:66352939:G>A),ATM(Chr11:108183205:G>T),B3GAT1(Chr11:134253926:G>A),BEND5(Chr1:49242286:G>A),BMP5(Chr6:55625314:G>T),BMP7(Chr20:55840775:C>A),C14orf177(Chr14:99182629:G>T),C1QTNF4(Chr11:47611638:G>A),C1S(Chr12:7170243:G>A),C7orf72(Chr7:50135861:C>A),C8orf34(Chr8:69243519:C>T),C9(Chr5:39308403:G>T),C9orf86(Chr9:139726258:G>A),CACNG6(Chr19:54496423:G>A),CADM2(Chr3:85932519:C>A),CCDC170(Chr6:151917469:G>T),CDH12(Chr5:21752076:G>T),CELSR3(Chr3:48694146:G>A),CLEC2B(Chr12:10006979:C>T),COL6A3(Chr2:238249551:C>T),CROCC(Chr1:17281988:G>A),CUL9(Chr6:43188564:G>A),DCDC1(Chr11:31329285:G>T),DDHD1(Chr14:53513595:G>A),DES(Chr2:220290456:C>T),DLG2(Chr11:84027872:G>T),DPYSL2(Chr8:26371901:T>A),DPYSL5(Chr2:27150238:G>A),EEF1A2(Chr20:62124537:G>A),EEF1D(Chr8:144671428:C>T),FBLN5(Chr14:92361292:A>T),FJX1(Chr11:35641259:C>A),GABRA1(Chr5:161300330:C>A),GIF(Chr11:59610594:C>T),GNAS(Chr20:57429700:C>T),GPR137(Chr11:64054488:T>C),GPR139(Chr16:20043437:C>T),GPR158(Chr10:25684847:C>A),GRIN3A(Chr9:104385599:C>T),GRIP2(Chr3:14555937:C>T),HEATR8(Chr1:55151997:C>G),HOMER2(Chr15:83527863:C>T),IK(Chr5:140035507:A>G),KBTBD4(Chr11:47599391:C>T),KDM3B(Chr5:137761136:T>A),KLHL32(Chr6:97423901:C>A),KLRC2(Chr12:10584718:C>G),LOXHD1(Chr18:44174396:G>T),LPL(Chr8:19811831:*>-G),LRGUK(Chr7:133948719:C>T),LRRC15(Chr3:194080610:A>G),LRRC18(Chr10:50121830:C>T),LRRC8A(Chr9:131669658:G>T),LTBP3(Chr11:65306697:C>T),MACF1(Chr1:39776007:G>T),MAGEC3(ChrX:140926189:G>T),MAPK8IP2(Chr22:51043086:C>T),MGA(Chr15:42052588:C>T),MICAL1(Chr6:109768314:G>A),MMP16(Chr8:89086900:C>T),MYO15A(Chr17:18024284:C>A),MYO16(Chr13:109792740:G>A),NAALAD2(Chr11:89911219:G>A),NEDD4(Chr15:56207510:C>A),NPR1(Chr1:153662438:C>T),NUBP1(Chr16:10837916:G>A),ODZ4(Chr11:78369282:G>A),OR51E1(Chr11:4674207:G>T),OR8K3(Chr11:56086506:G>T),PAPPA2(Chr1:176659409:C>A),PARP15(Chr3:122350994:G>C),PCDHB15(Chr5:140625822:G>A),PCDHB6(Chr5:140530972:G>T),PIK3IP1(Chr22:31679151:*>-CA),PIPOX(Chr17:27382890:*>+TGG),PLEK(Chr2:68609686:G>T),PLXNB3(ChrX:153033298:G>A),PPP4R4(Chr14:94700906:C>T),PTEN(Chr10:89717629:*>-C),PTPN22(Chr1:114391229:T>C),PTPRS(Chr19:5212481:C>T),PTPRU(Chr1:29602269:G>A),RAB18(Chr10:27822783:G>A),RAB3GAP2(Chr1:220338127:A>C),RASGRP2(Chr11:64507531:G>A),RIMKLB(Chr12:8926348:C>A),RNF40(Chr16:30780576:G>A),SCN11A(Chr3:38991804:C>A),SEC63(Chr6:108279142:*>+C),SLC26A9(Chr1:205899103:C>T),SLC7A13(Chr8:87242173:C>T),SOX11(Chr2:5832939:G>T),SOX5(Chr12:23757430:G>T),SPATA16(Chr3:172834965:C>A),SUSD1(Chr9:114874065:A>G),SV2A(Chr1:149882153:G>A),SYNE1(Chr6:152737540:C>T),TG(Chr8:133984055:C>T),TKT(Chr3:53289892:G>A),TMPRSS11A(Chr4:68784778:G>A),TRDN(Chr6:123658808:C>A),TRIM71(Chr3:32859909:G>A),TRMT5(Chr14:61446530:G>T),TTN(Chr2:179648990:G>T),UGCG(Chr9:114691873:G>T),VASN(Chr16:4432662:C>A),VILL(Chr3:38040481:A>T),WBSCR17(Chr7:70800701:C>T),ZADH2(Chr18:72913951:G>A),ZMYM4(Chr1:35885138:A>C),ZMYM6(Chr1:35453709:C>A),ZNF493(Chr19:21606080:G>T),ZNF646(Chr16:31089392:C>T),ZNF679(Chr7:63721228:G>T),ZNF764(Chr16:30566613:C>T),ZNF878(Chr19:12155657:G>T) |
EN1(Chr2:119600825:G>A),RABGGTA(Chr14:24737588:C>T) |
EP300(Chr22:41566474:C>T),GBA3(Chr4:22750457:*>-TAG),DNAH12(Chr3:57457329:A>G),PCDH15(Chr10:55996601:G>T),SMPD4(Chr2:130912761:C>T),ZNF221(Chr19:44470693:T>A),LRRC71(Chr1:156894222:C>T) |
| Rectal Cancer | p082_p2 | ADAM28(Chr8:24193068:G>A),ADAMTS8(Chr11:130275737:C>T),ALOX5(Chr10:45920489:G>A),APC(Chr5:112151261:C>T),BIVM-ERCC5(Chr13:103490998:C>A),C12orf59(Chr12:10339143:G>A),CHL1(Chr3:436537:T>C),CHRM2(Chr7:136700016:G>A),COL6A6(Chr3:130313177:G>A),CYP2S1(Chr19:41709472:C>T),DSCAML1(Chr11:117376186:C>T),ERBB2(Chr17:37871562:C>T),FAM50B(Chr6:3850779:C>T),FSTL5(Chr4:162307473:A>G),GPR35(Chr2:241570108:G>A),IGSF9B(Chr11:133795862:T>C),INADL(Chr1:62228715:G>A),ING1(Chr13:111371782:G>T),ITPR1(Chr3:4693862:G>A),KCNQ2(Chr20:62038068:C>T),KIAA0430(Chr16:15711247:C>T),LINGO2(Chr9:27949805:C>T),LUZP2(Chr11:24518806:C>T),MTA2(Chr11:62363306:C>A),NINL(Chr20:25459843:C>T),PAPPA(Chr9:118949523:G>A),PKDREJ(Chr22:46658705:C>T),PLXNA4(Chr7:131853201:C>T),PPARA(Chr22:46611073:C>A),PSPC1(Chr13:20315782:C>T),RRBP1(Chr20:17608235:C>T),SALL1(Chr16:51174374:G>A),SLC11A2(Chr12:51389498:T>G),TP53(Chr17:7577547:C>T),TTN(Chr2:179436184:C>A),USP4(Chr3:49318188:C>G),ZNF331(Chr19:54080503:T>G),ZPBP(Chr7:50070741:C>T) |
C6(Chr5:41181597:T>A),EFHB(Chr3:19924104:T>A),MOGS(Chr2:74689426:C>T),NUP98(Chr11:3735057:C>T),PDE11A(Chr2:178494202:C>T),PDE1C(Chr7:31848659:G>A),PXDNL(Chr8:52321392:T>A),RIMS2(Chr8:104898169:T>G),SYNE1(Chr6:152770673:C>T),SYNRG(Chr17:35937502:G>A),UNC5D(Chr8:35093382:C>T),UNC80(Chr2:210685335:G>T),VDR(Chr12:48258938:G>C),ZNF300(Chr5:150275830:G>A) |
A2ML1(Chr12:9001336:C>A),B4GALT3(Chr1:161145865:C>T),CXXC11(Chr2:242815023:C>A),DCAF8L1(ChrX:27998329:C>T),DLGAP2(Chr8:1497427:C>A),DPCR1(Chr6:30917171:G>T),GAD2(Chr10:26508182:C>T),HSPG2(Chr1:22178310:C>G),SHC1(Chr1:154938866:C>A),YSK4(Chr2:135745292:G>A),ZNF235(Chr19:44793043:G>C),ANKRD31(Chr5:74518160:G>A),APOBEC3H(Chr22:39497308:T>A),ASB10(Chr7:150873332:G>A),C10orf118(Chr10:115889716:C>T),CCDC169-SOHLH2(Chr13:36744849:A>G),CRAMP1L(Chr16:1675995:C>T),DCAF12L1(ChrX:125685736:A>C),DNAH8(Chr6:38750892:G>C),DSPP(Chr4:88533885:G>T),HAUS7(ChrX:152721808:G>A),HLA-DQA1(Chr6:32609935:A>T),JUP(Chr17:39913922:G>A),MAG(Chr19:35800821:G>A),NOD2(Chr16:50750801:G>T),PALB2(Chr16:23646651:C>T),VAV3(Chr1:108160190:C>A),YPEL5(Chr2:30379554:C>T),ZNF512B(Chr20:62593947:G>T),C19orf44(Chr19:16611911:G>A),CNOT1(Chr16:58562402:C>A),CPS1(Chr2:211521336:A>G),FAM171B(Chr2:187627270:A>C),FZD9(Chr7:72849407:A>G),LPHN3(Chr4:62758511:C>A),NRG1(Chr8:31498155:G>A),OR4C15(Chr11:55322161:T>C),OR4C3(Chr11:48347007:T>A),OR8G5(Chr11:124134859:A>T),PLCH1(Chr3:155199857:G>C),POM121L12(Chr7:53103786:T>C),PRKCG(Chr19:54407962:C>T),SAMD9L(Chr7:92763288:T>A),SAMD9L(Chr7:92763289:C>A),TSHZ2(Chr20:51872391:G>A),U2AF1(Chr21:44513237:*>+TC),CELA2B(Chr1:15809805:G>A),GPR37(Chr7:124386977:G>A),HIVEP1(Chr6:12122381:T>C),TENC1(Chr12:53454736:C>T),ADAM30(Chr1:120437072:G>T),EIF2C1(Chr1:36384759:G>T),EML2(Chr19:46119788:G>C),FAT4(Chr4:126367699:G>A),FZD8(Chr10:35929166:C>T),NPR2(Chr9:35799675:C>T),NRAP(Chr10:115391684:C>T),PLCXD2(Chr3:111426941:G>A),PODXL(Chr7:131191353:C>A),RNF213(Chr17:78367246:T>A),TAS2R16(Chr7:122635132:A>C),TXNDC5(Chr6:7888955:C>T),ZFHX4(Chr8:77766530:T>G),ZNF12(Chr7:6737018:C>T),ZNF334(Chr20:45131429:G>T) |
